Plugins

Browse plugins: 455

allencell-segmenter-ml

allencell-segmenter-ml

A plugin to leverage ML segmentation in napari

    • First released:

      20 September 2024
    • Last updated:

      18 October 2024
    • Installs:

      51
    • Plugin type:

      Widget

    napari-stitcher

    napari-stitcher

    Stitch napari image layers in 2-3D+t

    • Marvin Albert
    • First released:

      18 October 2024
    • Last updated:

      18 October 2024
    • Installs:

      0
    • Plugin type:

      Reader, Sample data, Widget, Writer

    EpiCure

    epicure

    Napari plugin to manually correct epithelia segmentation in movies

    • Gaëlle Letort
    • First released:

      18 October 2024
    • Last updated:

      18 October 2024
    • Installs:

      0
    • Plugin type:

      Widget
    Workflow step:
    Image annotation
    Image segmentation

    napari-assistant

    napari-assistant

    A pocket calculator like interface to image processing in napari

    • Robert Haase
    • Ryan Savill
    • First released:

      05 March 2022
    • Last updated:

      18 October 2024
    • Installs:

      21K
    • Plugin type:

      Widget

    devbio-napari

    devbio-napari

    A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology.

    • Robert Haase
    • First released:

      08 June 2021
    • Last updated:

      18 October 2024
    • Installs:

      3.1K
    • Plugin type:

      information not submitted

    napari_pyclesperanto_assistant

    napari-pyclesperanto-assistant

    GPU-accelerated image processing in napari using OpenCL

    • Robert Haase
    • Talley Lambert
    • First released:

      19 December 2020
    • Last updated:

      18 October 2024
    • Installs:

      7K
    • Plugin type:

      Sample data, Widget

    napari-svetlana

    napari-svetlana

    A classification plugin for the ROIs of a segmentation mask.

    • Clément Cazorla
    • First released:

      22 November 2022
    • Last updated:

      17 October 2024
    • Installs:

      1.2K
    • Plugin type:

      information not submitted

    splinebox

    napari-splinebox

    A plugin to create splines with napari.

    • Florian Aymanns
    • First released:

      01 October 2024
    • Last updated:

      17 October 2024
    • Installs:

      19
    • Plugin type:

      Widget
    Workflow step:
    Image annotation
    Image segmentation

    BrainGlobe Stitch

    brainglobe-stitch

    A tool to stich large tiled datasets generated by the mesoSPIM.

      • First released:

        16 October 2024
      • Last updated:

        16 October 2024
      • Installs:

        4
      • Plugin type:

        Widget

      Feature Forest

      featureforest

      A napari plugin for segmentation using vision transformer models' features

        • First released:

          10 October 2024
        • Last updated:

          16 October 2024
        • Installs:

          18
        • Plugin type:

          Widget
        Workflow step:
        Image segmentation
        Image annotation

        neuralDev

        napari-ndev

        A collection of widgets to process images from start to finish--focused on neural development.

        • Tim Monko
        • First released:

          31 January 2023
        • Last updated:

          16 October 2024
        • Installs:

          580
        • Plugin type:

          Reader, Widget

        napari ConvPaint

        napari-convpaint

        A plugin for segmentation by pixel classification using convolutional feature extraction

        • Guillaume Witz
        • First released:

          01 November 2023
        • Last updated:

          15 October 2024
        • Installs:

          1.9K
        • Plugin type:

          Sample data, Widget

        microscope-napari

        microscope-napari

        Nanobiosensorics microscopic napari plugin.

        • Nanobiosensorics
        • First released:

          21 June 2024
        • Last updated:

          15 October 2024
        • Installs:

          130
        • Plugin type:

          Sample data, Widget

        3D Counter

        napari-3d-counter

        A simple plugin for counting objects in 3D images

        • Peter Newstein
        • First released:

          18 October 2023
        • Last updated:

          15 October 2024
        • Installs:

          493
        • Plugin type:

          Widget

        napari-bbox-spfluo

        napari-bbox-spfluo

        A new layer for bounding boxes in 2+ dimensions. Fork of napari-bbox for spfluo-app needs.

          • First released:

            04 October 2024
          • Last updated:

            15 October 2024
          • Installs:

            112
          • Plugin type:

            information not submitted